Bitnome | Methods and sources
Methods and analysis records
An analysis plan connects the research question, study design, methods, and reporting requirements.
Before analysis
- Review sample identities, study groups, replication and covariates.
- Confirm file types, assay, organism, reference assembly and available controls.
- Agree on the comparisons and outputs supported by the study.
Analysis documentation
| Data | Input inventory, identifiers, metadata, provenance and exclusions. |
|---|---|
| Methods | Software versions, reference resources, parameters and analysis contrasts. |
| Results | QC decisions, figures, supporting tables and interpretation limits. |
| Delivery | Agreed report formats, analysis records and reproducibility requirements. |